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LOC112125774 cadherin EGF LAG seven-pass G-type receptor 2 [ Terrapene carolina triunguis (Three-toed box turtle) ]

Gene ID: 112125774, updated on 28-Dec-2023

Summary

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Gene symbol
LOC112125774
Gene description
cadherin EGF LAG seven-pass G-type receptor 2
See related
Ensembl:ENSTMTG00000019726
Gene type
protein coding
RefSeq status
MODEL
Organism
Terrapene carolina triunguis (sub-species: triunguis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
Also known as
CELSR2
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Genomic context

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Location:
chromosome: Un
Exon count:
35
Annotation release Status Assembly Chr Location
102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020696239.1 (263823..328629, complement)
100 previous assembly T_m_triunguis-1.0 (GCF_002925995.1) Unplaced Scaffold NW_019958411.1 (868716..924266)

NW_020696239.1Genomic Context describing neighboring genes Neighboring gene peptidyl-prolyl cis-trans isomerase-like 1 Neighboring gene proline/serine-rich coiled-coil protein 1-like Neighboring gene serine--tRNA ligase, cytoplasmic Neighboring gene UPF0577 protein KIAA1324-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cadherin EGF LAG seven-pass G-type receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T_m_triunguis-2.0

Genomic

  1. NW_020696239.1 Reference T_m_triunguis-2.0

    Range
    263823..328629 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026663011.1 → XP_026518796.1  cadherin EGF LAG seven-pass G-type receptor 2

    UniProtKB/TrEMBL
    A0A674K2G1
    Related
    ENSTMTP00000027133.1, ENSTMTT00000028112.1
    Conserved Domains (10) summary
    smart00303
    Location:2301 → 2354
    GPS; G-protein-coupled receptor proteolytic site domain
    cd11304
    Location:380 → 477
    Cadherin_repeat; Cadherin tandem repeat domain
    smart00008
    Location:1951 → 2013
    HormR; Domain present in hormone receptors
    smart00180
    Location:1903 → 1948
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:1614 → 1746
    LamG; Laminin G domain
    cd00054
    Location:1264 → 1299
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00110
    Location:1344 → 1527
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cd15992
    Location:2359 → 2612
    7tmB2_CELSR2; Cadherin EGF LAG seven-pass G-type receptor 2, member of the class B2 family of seven-transmembrane G protein-coupled receptors
    pfam00008
    Location:1553 → 1583
    EGF; EGF-like domain
    pfam16489
    Location:2031 → 2274
    GAIN; GPCR-Autoproteolysis INducing (GAIN) domain
Nucleotide Protein
Heading Accession and Version

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