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UTRN utrophin [ Terrapene carolina triunguis (Three-toed box turtle) ]

Gene ID: 112120689, updated on 15-Mar-2024

Summary

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Gene symbol
UTRN
Gene description
utrophin
See related
Ensembl:ENSTMTG00000005482
Gene type
protein coding
RefSeq status
MODEL
Organism
Terrapene carolina triunguis (sub-species: triunguis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
74
Annotation release Status Assembly Chr Location
102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020664436.1 (44467035..44980590, complement)
100 previous assembly T_m_triunguis-1.0 (GCF_002925995.1) Unplaced Scaffold NW_019958874.1 (2684491..3215561, complement)

NW_020664436.1Genomic Context describing neighboring genes Neighboring gene F-box protein 30 Neighboring gene EPM2A glucan phosphatase, laforin Neighboring gene transfer RNA leucine (anticodon UAA) Neighboring gene syntaxin 11 Neighboring gene splicing factor 3b subunit 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in synaptic signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
utrophin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T_m_triunguis-2.0

Genomic

  1. NW_020664436.1 Reference T_m_triunguis-2.0

    Range
    44467035..44980590 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026649537.2 → XP_026505322.1  utrophin

    UniProtKB/TrEMBL
    A0A674IIU5
    Related
    ENSTMTP00000007559.1, ENSTMTT00000007809.1
    Conserved Domains (8) summary
    COG5069
    Location:37 → 252
    SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
    cd00176
    Location:316 → 531
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cd00201
    Location:2930 → 2958
    WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
    cd02334
    Location:3181 → 3229
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    TIGR02168
    Location:432 → 1351
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd15901
    Location:2995 → 3034
    EFh_DMD_DYTN_DTN; EF-hand-like motif [structural motif]
    cl02488
    Location:1440 → 1649
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl07621
    Location:2995 → 3156
    EFh_DMD_DYTN_DTN; EF-hand-like motif found in the dystrophin/dystrobrevin/dystrotelin family
Nucleotide Protein
Heading Accession and Version

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