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IFT27 intraflagellar transport 27 [ Terrapene carolina triunguis (Three-toed box turtle) ]

Gene ID: 112118885, updated on 15-Mar-2024

Summary

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Gene symbol
IFT27
Gene description
intraflagellar transport 27
See related
Ensembl:ENSTMTG00000007150
Gene type
protein coding
RefSeq status
MODEL
Organism
Terrapene carolina triunguis (sub-species: triunguis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
Orthologs
human mouse all
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Genomic context

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See IFT27 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020664598.1 (4452650..4463250)
100 previous assembly T_m_triunguis-1.0 (GCF_002925995.1) Unplaced Scaffold NW_019962999.1 (63905..70813)

NW_020664598.1Genomic Context describing neighboring genes Neighboring gene neutrophil cytosolic factor 4 Neighboring gene parvalbumin Neighboring gene calcium voltage-gated channel auxiliary subunit gamma 2 Neighboring gene eukaryotic translation initiation factor 3 subunit D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
intraflagellar transport protein 27 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T_m_triunguis-2.0

Genomic

  1. NW_020664598.1 Reference T_m_triunguis-2.0

    Range
    4452650..4463250
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026657568.1 → XP_026513353.1  intraflagellar transport protein 27 homolog isoform X1

    UniProtKB/TrEMBL
    A0A674INR9
    Related
    ENSTMTP00000009798.1, ENSTMTT00000010131.1
    Conserved Domains (1) summary
    cl38936
    Location:6 → 172
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  2. XM_026657567.1 → XP_026513352.1  intraflagellar transport protein 27 homolog isoform X1

    UniProtKB/TrEMBL
    A0A674INR9
    Conserved Domains (1) summary
    cl38936
    Location:6 → 172
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  3. XM_026657571.1 → XP_026513356.1  intraflagellar transport protein 27 homolog isoform X2

    Conserved Domains (1) summary
    cl38936
    Location:6 → 152
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version

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