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RCOR1 REST corepressor 1 [ Terrapene carolina triunguis (Three-toed box turtle) ]

Gene ID: 112117261, updated on 15-Mar-2024

Summary

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Gene symbol
RCOR1
Gene description
REST corepressor 1
See related
Ensembl:ENSTMTG00000016172
Gene type
protein coding
RefSeq status
MODEL
Organism
Terrapene carolina triunguis (sub-species: triunguis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020664540.1 (483241..608323)
100 previous assembly T_m_triunguis-1.0 (GCF_002925995.1) Unplaced Scaffold NW_019962455.1 (400146..516621)

NW_020664540.1Genomic Context describing neighboring genes Neighboring gene tectonin beta-propeller repeat containing 2 Neighboring gene ankyrin repeat domain 9 Neighboring gene TNF receptor associated factor 3 Neighboring gene amnion associated transmembrane protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone deacetylase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
REST corepressor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T_m_triunguis-2.0

Genomic

  1. NW_020664540.1 Reference T_m_triunguis-2.0

    Range
    483241..608323
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024215188.3 → XP_024070956.2  REST corepressor 1

    UniProtKB/TrEMBL
    A0A674JLB2
    Related
    ENSTMTP00000022145.1, ENSTMTT00000022932.1
    Conserved Domains (3) summary
    pfam00249
    Location:350 → 393
    Myb_DNA-binding; Myb-like DNA-binding domain
    pfam01448
    Location:70 → 123
    ELM2; ELM2 domain
    cl21498
    Location:159 → 203
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
Nucleotide Protein
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