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LOC112116818 probable inactive 1-aminocyclopropane-1-carboxylate synthase-like protein 2 [ Terrapene carolina triunguis (Three-toed box turtle) ]

Gene ID: 112116818, updated on 28-Dec-2023

Summary

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Gene symbol
LOC112116818
Gene description
probable inactive 1-aminocyclopropane-1-carboxylate synthase-like protein 2
See related
Ensembl:ENSTMTG00000009155
Gene type
protein coding
RefSeq status
MODEL
Organism
Terrapene carolina triunguis (sub-species: triunguis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
Also known as
ACCS
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Genomic context

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See LOC112116818 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020664447.1 (27637245..27654769)
100 previous assembly T_m_triunguis-1.0 (GCF_002925995.1) Unplaced Scaffold NW_019958828.1 (12378..46059)

NW_020664447.1Genomic Context describing neighboring genes Neighboring gene alkB homolog 3, alpha-ketoglutarate dependent dioxygenase Neighboring gene chromosome unknown C11orf96 homolog Neighboring gene exostosin glycosyltransferase 2 Neighboring gene ALX homeobox 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable inactive 1-aminocyclopropane-1-carboxylate synthase-like protein 2
Names
1-aminocyclopropane-1-carboxylate synthase homolog (inactive)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T_m_triunguis-2.0

Genomic

  1. NW_020664447.1 Reference T_m_triunguis-2.0

    Range
    27637245..27654769
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024214527.3 → XP_024070295.2  probable inactive 1-aminocyclopropane-1-carboxylate synthase-like protein 2

    UniProtKB/TrEMBL
    A0A674IT19
    Related
    ENSTMTP00000012656.1, ENSTMTT00000013094.1
    Conserved Domains (3) summary
    PLN02450
    Location:404 → 796
    PLN02450; 1-aminocyclopropane-1-carboxylate synthase
    pfam13837
    Location:13 → 100
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
    pfam15236
    Location:208 → 308
    CCDC66; Coiled-coil domain-containing protein 66
Nucleotide Protein
Heading Accession and Version

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