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EDF1 endothelial differentiation related factor 1 [ Terrapene carolina triunguis (Three-toed box turtle) ]

Gene ID: 112115321, updated on 15-Mar-2024

Summary

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Gene symbol
EDF1
Gene description
endothelial differentiation related factor 1
See related
Ensembl:ENSTMTG00000004916
Gene type
protein coding
RefSeq status
MODEL
Organism
Terrapene carolina triunguis (sub-species: triunguis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020664800.1 (383625..403132, complement)
100 previous assembly T_m_triunguis-1.0 (GCF_002925995.1) Unplaced Scaffold NW_019961992.1 (252781..275093, complement)

NW_020664800.1Genomic Context describing neighboring genes Neighboring gene MAM domain containing 4 Neighboring gene transforming growth factor-beta receptor-associated protein 1-like Neighboring gene TNF receptor associated factor 2 Neighboring gene F-box and WD repeat domain containing 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endothelial differentiation-related factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T_m_triunguis-2.0

Genomic

  1. NW_020664800.1 Reference T_m_triunguis-2.0

    Range
    383625..403132 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026658498.2 → XP_026514283.1  endothelial differentiation-related factor 1

    UniProtKB/TrEMBL
    A0A674IGE1
    Related
    ENSTMTP00000006729.1, ENSTMTT00000006951.1
    Conserved Domains (2) summary
    cl26727
    Location:48 → 147
    aMBF1; Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains [Translation, ribosomal structure and biogenesis]
    pfam08523
    Location:5 → 71
    MBF1; Multiprotein bridging factor 1
Nucleotide Protein
Heading Accession and Version

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