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IDI1 isopentenyl-diphosphate delta isomerase 1 [ Terrapene carolina triunguis (Three-toed box turtle) ]

Gene ID: 112109460, updated on 15-Mar-2024

Summary

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Gene symbol
IDI1
Gene description
isopentenyl-diphosphate delta isomerase 1
See related
Ensembl:ENSTMTG00000000994
Gene type
protein coding
RefSeq status
MODEL
Organism
Terrapene carolina triunguis (sub-species: triunguis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
Orthologs
human mouse all
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Genomic context

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See IDI1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020664462.1 (20161098..20182877, complement)
100 previous assembly T_m_triunguis-1.0 (GCF_002925995.1) Unplaced Scaffold NW_019960532.1 (51126..85557, complement)

NW_020664462.1Genomic Context describing neighboring genes Neighboring gene La ribonucleoprotein 4B Neighboring gene GTP binding protein 4 Neighboring gene WD repeat domain 37 Neighboring gene adenosine deaminase RNA specific B2 (inactive)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables isopentenyl-diphosphate delta-isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isopentenyl diphosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in isoprenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
isopentenyl-diphosphate Delta-isomerase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T_m_triunguis-2.0

Genomic

  1. NW_020664462.1 Reference T_m_triunguis-2.0

    Range
    20161098..20182877 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024203982.3 → XP_024059750.2  isopentenyl-diphosphate Delta-isomerase 1 isoform X3

    Conserved Domains (1) summary
    cl00447
    Location:1 → 227
    Nudix_Hydrolase; Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ ...

  2. XM_026652004.2 → XP_026507789.1  isopentenyl-diphosphate Delta-isomerase 1 isoform X2

    UniProtKB/TrEMBL
    A0A674HVY8
    Related
    ENSTMTP00000001206.1, ENSTMTT00000001242.1
    Conserved Domains (1) summary
    cl00447
    Location:33 → 262
    Nudix_Hydrolase; Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ ...

  3. XM_024203984.3 → XP_024059752.2  isopentenyl-diphosphate Delta-isomerase 1 isoform X3

    Conserved Domains (1) summary
    cl00447
    Location:1 → 227
    Nudix_Hydrolase; Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ ...

  4. XM_024203981.3 → XP_024059749.2  isopentenyl-diphosphate Delta-isomerase 1 isoform X1

    Conserved Domains (1) summary
    cl00447
    Location:42 → 271
    Nudix_Hydrolase; Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ ...

  5. XM_024203983.3 → XP_024059751.2  isopentenyl-diphosphate Delta-isomerase 1 isoform X3

    Conserved Domains (1) summary
    cl00447
    Location:1 → 227
    Nudix_Hydrolase; Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ ...
Nucleotide Protein
Heading Accession and Version

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