U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RAE1 ribonucleic acid export 1 [ Terrapene carolina triunguis (Three-toed box turtle) ]

Gene ID: 112107827, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
RAE1
Gene description
ribonucleic acid export 1
See related
Ensembl:ENSTMTG00000001345
Gene type
protein coding
RefSeq status
MODEL
Organism
Terrapene carolina triunguis (sub-species: triunguis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020664481.1 (12086561..12099283, complement)
100 previous assembly T_m_triunguis-1.0 (GCF_002925995.1) Unplaced Scaffold NW_019960119.1 (323703..336411)

NW_020664481.1Genomic Context describing neighboring genes Neighboring gene CCCTC-binding factor like Neighboring gene RNA binding motif protein 38 Neighboring gene SPO11 initiator of meiotic double strand breaks Neighboring gene bone morphogenetic protein 7

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
mRNA export factor

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T_m_triunguis-2.0

Genomic

  1. NW_020664481.1 Reference T_m_triunguis-2.0

    Range
    12086561..12099283 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024201710.2 → XP_024057478.1  mRNA export factor

    UniProtKB/TrEMBL
    A0A674I189
    Related
    ENSTMTP00000001682.1, ENSTMTT00000001735.1
    Conserved Domains (2) summary
    sd00039
    Location:42 → 84
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:40 → 335
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.