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TMTC2 transmembrane O-mannosyltransferase targeting cadherins 2 [ Terrapene carolina triunguis (Three-toed box turtle) ]

Gene ID: 112107234, updated on 15-Mar-2024

Summary

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Gene symbol
TMTC2
Gene description
transmembrane O-mannosyltransferase targeting cadherins 2
See related
Ensembl:ENSTMTG00000000433
Gene type
protein coding
RefSeq status
MODEL
Organism
Terrapene carolina triunguis (sub-species: triunguis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020664419.1 (68472327..68844010)
100 previous assembly T_m_triunguis-1.0 (GCF_002925995.1) Unplaced Scaffold NW_019960029.1 (1050047..1185416)

NW_020664419.1Genomic Context describing neighboring genes Neighboring gene methyltransferase like 25 Neighboring gene coiled-coil domain containing 59 Neighboring gene solute carrier family 6 member 15 Neighboring gene tetraspanin 19

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase TMTC2
Names
transmembrane and tetratricopeptide repeat containing 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T_m_triunguis-2.0

Genomic

  1. NW_020664419.1 Reference T_m_triunguis-2.0

    Range
    68472327..68844010
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029910867.1 → XP_029766727.1  protein O-mannosyl-transferase TMTC2

    UniProtKB/TrEMBL
    A0A674HW21
    Related
    ENSTMTP00000000520.1, ENSTMTT00000000534.1
    Conserved Domains (5) summary
    COG0457
    Location:442 → 728
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:493 → 521
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:777 → 810
    TPR_1; Tetratricopeptide repeat
    pfam08409
    Location:247 → 321
    DUF1736; Domain of unknown function (DUF1736)
    cl21590
    Location:77 → 247
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

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