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TRIM32 tripartite motif containing 32 [ Terrapene carolina triunguis (Three-toed box turtle) ]

Gene ID: 112105167, updated on 15-Mar-2024

Summary

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Gene symbol
TRIM32
Gene description
tripartite motif containing 32
See related
Ensembl:ENSTMTG00000021501
Gene type
protein coding
RefSeq status
MODEL
Organism
Terrapene carolina triunguis (sub-species: triunguis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
Orthologs
human mouse all
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Genomic context

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See TRIM32 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020664589.1 (3167575..3171922)
100 previous assembly T_m_triunguis-1.0 (GCF_002925995.1) Unplaced Scaffold NW_019959617.1 (656414..662614)

NW_020664589.1Genomic Context describing neighboring genes Neighboring gene tenascin C Neighboring gene pappalysin 1 Neighboring gene astrotactin 2 Neighboring gene CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like Neighboring gene toll like receptor 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase TRIM32

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T_m_triunguis-2.0

Genomic

  1. NW_020664589.1 Reference T_m_triunguis-2.0

    Range
    3167575..3171922
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024197847.2 → XP_024053615.1  E3 ubiquitin-protein ligase TRIM32

    UniProtKB/TrEMBL
    A0A674K802
    Related
    ENSTMTP00000029735.1, ENSTMTT00000030823.1
    Conserved Domains (4) summary
    smart00935
    Location:136 → 224
    OmpH; Outer membrane protein (OmpH-like)
    cd14961
    Location:356 → 638
    NHL_TRIM32_like; NHL repeat domain of the tripartite motif-containing protein 32 (TRIM32) and related proteins
    cd16587
    Location:17 → 63
    RING-HC_TRIM32_C-VII; RING finger, HC subclass, found in tripartite motif-containing protein 32 (TRIM32) and similar proteins
    cd19806
    Location:96 → 136
    Bbox1_TRIM32_C-VII; B-box-type 1 zinc finger found in tripartite motif-containing protein 32 (TRIM32) and similar proteins
Nucleotide Protein
Heading Accession and Version

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