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IFT20 intraflagellar transport 20 [ Terrapene carolina triunguis (Three-toed box turtle) ]

Gene ID: 112103569, updated on 15-Mar-2024

Summary

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Gene symbol
IFT20
Gene description
intraflagellar transport 20
See related
Ensembl:ENSTMTG00000019877
Gene type
protein coding
RefSeq status
MODEL
Organism
Terrapene carolina triunguis (sub-species: triunguis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020664582.1 (10943917..10948783)
100 previous assembly T_m_triunguis-1.0 (GCF_002925995.1) Unplaced Scaffold NW_019959312.1 (3037195..3040443, complement)

NW_020664582.1Genomic Context describing neighboring genes Neighboring gene small G protein signaling modulator 2 Neighboring gene TNF alpha induced protein 1 Neighboring gene transmembrane protein 97 Neighboring gene nemo like kinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in centrosome localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intraciliary transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of intraciliary transport particle B IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
intraflagellar transport protein 20 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T_m_triunguis-2.0

Genomic

  1. NW_020664582.1 Reference T_m_triunguis-2.0

    Range
    10943917..10948783
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026656555.2 → XP_026512340.1  intraflagellar transport protein 20 homolog

    UniProtKB/TrEMBL
    A0A674K2P5
    Conserved Domains (1) summary
    pfam14931
    Location:10 → 128
    IFT20; Intraflagellar transport complex B, subunit 20

  2. XM_026656553.2 → XP_026512338.1  intraflagellar transport protein 20 homolog

    UniProtKB/TrEMBL
    A0A674K2P5
    Related
    ENSTMTP00000027213.1, ENSTMTT00000028193.1
    Conserved Domains (1) summary
    pfam14931
    Location:10 → 128
    IFT20; Intraflagellar transport complex B, subunit 20

  3. XM_026656554.2 → XP_026512339.1  intraflagellar transport protein 20 homolog

    UniProtKB/TrEMBL
    A0A674K2P5
    Conserved Domains (1) summary
    pfam14931
    Location:10 → 128
    IFT20; Intraflagellar transport complex B, subunit 20
Nucleotide Protein
Heading Accession and Version

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