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LOC112103412 influenza virus NS1A-binding protein homolog [ Terrapene carolina triunguis (Three-toed box turtle) ]

Gene ID: 112103412, updated on 28-Dec-2023

Summary

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Gene symbol
LOC112103412
Gene description
influenza virus NS1A-binding protein homolog
See related
Ensembl:ENSTMTG00000005535
Gene type
protein coding
RefSeq status
MODEL
Organism
Terrapene carolina triunguis (sub-species: triunguis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
Also known as
IVNS1ABP
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020664561.1 (16166777..16189666, complement)
100 previous assembly T_m_triunguis-1.0 (GCF_002925995.1) Unplaced Scaffold NW_019959288.1 (1113978..1136670)

NW_020664561.1Genomic Context describing neighboring genes Neighboring gene TRMT1-like protein Neighboring gene transcriptional protein SWT1-like Neighboring gene hemicentin-1 Neighboring gene proteoglycan 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
influenza virus NS1A-binding protein homolog
Names
influenza virus NS1A binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T_m_triunguis-2.0

Genomic

  1. NW_020664561.1 Reference T_m_triunguis-2.0

    Range
    16166777..16189666 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024195143.3 → XP_024050911.1  influenza virus NS1A-binding protein homolog isoform X1

    Conserved Domains (4) summary
    PHA03098
    Location:23 → 653
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:464 → 509
    Kelch; KELCH repeat [structural motif]
    cd18306
    Location:14 → 137
    BTB_POZ_NS1BP; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Influenza virus NS1A-binding protein (NS1-BP)
    cd18502
    Location:129 → 225
    BACK_NS1BP_IVNS1ABP; BACK (BTB and C-terminal Kelch) domain found in influenza virus NS1A-binding protein (NS1-BP)

  2. XM_024195144.3 → XP_024050912.1  influenza virus NS1A-binding protein homolog isoform X2

    UniProtKB/TrEMBL
    A0A674IIM4
    Related
    ENSTMTP00000007612.1, ENSTMTT00000007864.1
    Conserved Domains (4) summary
    PHA03098
    Location:23 → 642
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:453 → 498
    Kelch; KELCH repeat [structural motif]
    cd18306
    Location:14 → 137
    BTB_POZ_NS1BP; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Influenza virus NS1A-binding protein (NS1-BP)
    cd18502
    Location:129 → 225
    BACK_NS1BP_IVNS1ABP; BACK (BTB and C-terminal Kelch) domain found in influenza virus NS1A-binding protein (NS1-BP)
Nucleotide Protein
Heading Accession and Version

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