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rab5if RAB5 interacting factor [ Salvelinus alpinus (Arctic char) ]

Gene ID: 111976773, updated on 15-Mar-2024

Summary

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Gene symbol
rab5if
Gene description
RAB5 interacting factor
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus alpinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
Also known as
lg17h20orf24
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG17
Exon count:
4
Annotation release Status Assembly LG Location
101 current ASM291031v2 (GCF_002910315.2) LG17 NC_036857.1 (4277526..4281462)

Linkage Group LG17 - NC_036857.1Genomic Context describing neighboring genes Neighboring gene phospholipase C, gamma 1 Neighboring gene U2 spliceosomal RNA Neighboring gene zinc fingers and homeoboxes 3b Neighboring gene DEAH-box helicase 35 Neighboring gene MAF bZIP transcription factor Ba

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036857.1 Chromosome LG17 Reference ASM291031v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitochondrial respirasome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: uncharacterized protein C20orf24 homolog
Names
linkage group 17 C20orf24 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM291031v2 Primary Assembly

Genomic

  1. NC_036857.1 Reference ASM291031v2 Primary Assembly

    Range
    4277526..4281462
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024005888.1 → XP_023861656.1  LOW QUALITY PROTEIN: uncharacterized protein C20orf24 homolog

    Conserved Domains (1) summary
    pfam07019
    Location:42 → 118
    Rab5ip; Rab5-interacting protein (Rab5ip)
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases