U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

gpt2 glutamic pyruvate transaminase (alanine aminotransferase) 2 [ Salvelinus alpinus (Arctic char) ]

Gene ID: 111969252, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
gpt2
Gene description
glutamic pyruvate transaminase (alanine aminotransferase) 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus alpinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See gpt2 in Genome Data Viewer
Location:
chromosome: LG10
Exon count:
11
Annotation release Status Assembly LG Location
101 current ASM291031v2 (GCF_002910315.2) LG10 NC_036850.1 (9320230..9331726, complement)

Linkage Group LG10 - NC_036850.1Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member A2a Neighboring gene borealin-2-like Neighboring gene linkage group 10 C16orf87 homolog Neighboring gene myosin light chain kinase 3

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_036850.1 Chromosome LG10 Reference ASM291031v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-alanine:2-oxoglutarate aminotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alanine aminotransferase 2
Names
glutamic--pyruvic transaminase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM291031v2 Primary Assembly

Genomic

  1. NC_036850.1 Reference ASM291031v2 Primary Assembly

    Range
    9320230..9331726 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023995263.1 → XP_023851031.1  alanine aminotransferase 2

    Conserved Domains (1) summary
    cl27741
    Location:70 → 549
    Aminotran_1_2; Aminotransferase class I and II
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.