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vmp1 vacuole membrane protein 1 [ Salvelinus alpinus (Arctic char) ]

Gene ID: 111949776, updated on 11-Jan-2024

Summary

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Gene symbol
vmp1
Gene description
vacuole membrane protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus alpinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
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Genomic context

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Location:
chromosome: LG22
Exon count:
12
Annotation release Status Assembly LG Location
101 current ASM291031v2 (GCF_002910315.2) LG22 NC_036862.1 (26831840..26849680, complement)

Linkage Group LG22 - NC_036862.1Genomic Context describing neighboring genes Neighboring gene mediator of RNA polymerase II transcription subunit 13-like Neighboring gene ribosomal protein S6 kinase beta-1 Neighboring gene tubulin, delta 1 Neighboring gene uncharacterized LOC111949373 Neighboring gene serine-protein kinase ATM-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036862.1 Chromosome LG22 Reference ASM291031v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vacuole membrane protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM291031v2 Primary Assembly

Genomic

  1. NC_036862.1 Reference ASM291031v2 Primary Assembly

    Range
    26831840..26849680 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023967127.1 → XP_023822895.1  vacuole membrane protein 1

    Conserved Domains (1) summary
    cl00429
    Location:246 → 296
    SNARE_assoc; SNARE associated Golgi protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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