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DCP2 decapping mRNA 2 [ Cyanistes caeruleus (blue tit) ]

Gene ID: 111941736, updated on 15-Mar-2024

Summary

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Gene symbol
DCP2
Gene description
decapping mRNA 2
See related
Ensembl:ENSCCEG00000009668
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyanistes caeruleus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Cyanistes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Z
Exon count:
11
Annotation release Status Assembly Chr Location
100 current cyaCae2 (GCF_002901205.1) Z Unlocalized Scaffold NW_019776580.1 (48527..69113)

NW_019776580.1Genomic Context describing neighboring genes Neighboring gene signal recognition particle 19 Neighboring gene receptor accessory protein 5 Neighboring gene MCC regulator of WNT signaling pathway Neighboring gene probable ATP-dependent RNA helicase YTHDC2 Neighboring gene uncharacterized LOC111941756

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019776580 Chromosome Z Unlocalized Scaffold Reference cyaCae2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables manganese ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in deadenylation-dependent decapping of nuclear-transcribed mRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
m7GpppN-mRNA hydrolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyanistes caeruleus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference cyaCae2

Genomic

  1. NW_019776580.1 Reference cyaCae2

    Range
    48527..69113
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023944919.1 → XP_023800687.1  m7GpppN-mRNA hydrolase

    UniProtKB/TrEMBL
    A0A8C0UNC6
    Related
    ENSCCEP00000009549.1, ENSCCET00000015094.1
    Conserved Domains (2) summary
    cd03672
    Location:167 → 316
    Dcp2p; mRNA decapping enzyme 2 (Dcp2p), the catalytic subunit, and Dcp1p are the two components of the decapping enzyme complex. Decapping is a key step in both general and nonsense-mediated 5'->3' mRNA-decay pathways. Dcp2p contains an all-alpha helical ...
    pfam05026
    Location:88 → 163
    DCP2; Dcp2, box A domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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