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SLCO4C1 solute carrier organic anion transporter family member 4C1 [ Cyanistes caeruleus (blue tit) ]

Gene ID: 111940870, updated on 15-Mar-2024

Summary

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Gene symbol
SLCO4C1
Gene description
solute carrier organic anion transporter family member 4C1
See related
Ensembl:ENSCCEG00000017286
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyanistes caeruleus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Cyanistes
Orthologs
human mouse all
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Genomic context

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See SLCO4C1 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
15
Annotation release Status Assembly Chr Location
100 current cyaCae2 (GCF_002901205.1) Z Unlocalized Scaffold NW_019776556.1 (19636037..19665429)

NW_019776556.1Genomic Context describing neighboring genes Neighboring gene gypsy retrotransposon integrase 1 Neighboring gene peptidylglycine alpha-amidating monooxygenase Neighboring gene uncharacterized LOC111940773 Neighboring gene uncharacterized LOC111940831 Neighboring gene uncharacterized LOC111940832 Neighboring gene serine/threonine-protein kinase PAK 3-like Neighboring gene uncharacterized protein DDB_G0290301-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019776556 Chromosome Z Unlocalized Scaffold Reference cyaCae2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sodium-independent organic anion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sodium-independent organic anion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier organic anion transporter family member 4C1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyanistes caeruleus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference cyaCae2

Genomic

  1. NW_019776556.1 Reference cyaCae2

    Range
    19636037..19665429
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023943727.1 → XP_023799495.1  solute carrier organic anion transporter family member 4C1

    UniProtKB/TrEMBL
    A0A8C0VAW7
    Related
    ENSCCEP00000018998.1, ENSCCET00000028929.1
    Conserved Domains (2) summary
    pfam00552
    Location:9 → 33
    IN_DBD_C; Integrase DNA binding domain
    pfam03137
    Location:131 → 696
    OATP; Organic Anion Transporter Polypeptide (OATP) family
Nucleotide Protein
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