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HCN2 hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 [ Cyanistes caeruleus (blue tit) ]

Gene ID: 111940238, updated on 15-Mar-2024

Summary

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Gene symbol
HCN2
Gene description
hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyanistes caeruleus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Cyanistes
Orthologs
human mouse all
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Genomic context

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See HCN2 in Genome Data Viewer
Location:
chromosome: 28
Exon count:
8
Annotation release Status Assembly Chr Location
100 current cyaCae2 (GCF_002901205.1) 28 Unlocalized Scaffold NW_019776550.1 (3109270..3118418)

NW_019776550.1Genomic Context describing neighboring genes Neighboring gene cell division cycle 34, ubiqiutin conjugating enzyme Neighboring gene basigin (Ok blood group) Neighboring gene RNA polymerase mitochondrial Neighboring gene follistatin like 3 Neighboring gene paralemmin Neighboring gene mitotic spindle positioning

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019776550 Chromosome 28 Unlocalized Scaffold Reference cyaCae2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables voltage-gated potassium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in potassium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyanistes caeruleus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference cyaCae2

Genomic

  1. NW_019776550.1 Reference cyaCae2

    Range
    3109270..3118418
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023942831.1 → XP_023798599.1  potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2

    UniProtKB/TrEMBL
    A0A8C0U2F8
    Conserved Domains (2) summary
    cd00038
    Location:327 → 435
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    cl26073
    Location:1 → 472
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
Heading Accession and Version

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