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SNF8 SNF8 subunit of ESCRT-II [ Cyanistes caeruleus (blue tit) ]

Gene ID: 111940135, updated on 15-Mar-2024

Summary

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Gene symbol
SNF8
Gene description
SNF8 subunit of ESCRT-II
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyanistes caeruleus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Cyanistes
Orthologs
human mouse all
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Genomic context

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See SNF8 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
8
Annotation release Status Assembly Chr Location
100 current cyaCae2 (GCF_002901205.1) 27 Unlocalized Scaffold NW_019776548.1 (2546139..2550179)

NW_019776548.1Genomic Context describing neighboring genes Neighboring gene homeobox protein Hox-B4-like Neighboring gene homeobox B6 Neighboring gene ubiquitin conjugating enzyme E2 Z Neighboring gene insulin like growth factor 2 mRNA binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019776548 Chromosome 27 Unlocalized Scaffold Reference cyaCae2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT II complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vacuolar-sorting protein SNF8
Names
SNF8, ESCRT-II complex subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyanistes caeruleus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference cyaCae2

Genomic

  1. NW_019776548.1 Reference cyaCae2

    Range
    2546139..2550179
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023942719.1 → XP_023798487.1  vacuolar-sorting protein SNF8 isoform X1

    Conserved Domains (1) summary
    pfam04157
    Location:1 → 190
    EAP30; EAP30/Vps36 family

  2. XM_023942720.1 → XP_023798488.1  vacuolar-sorting protein SNF8 isoform X2

    Conserved Domains (1) summary
    pfam04157
    Location:1 → 136
    EAP30; EAP30/Vps36 family
Nucleotide Protein
Heading Accession and Version

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