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NEIL1 nei like DNA glycosylase 1 [ Cyanistes caeruleus (blue tit) ]

Gene ID: 111934267, updated on 15-Mar-2024

Summary

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Gene symbol
NEIL1
Gene description
nei like DNA glycosylase 1
See related
Ensembl:ENSCCEG00000023694
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyanistes caeruleus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Cyanistes
Orthologs
human mouse all
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Genomic context

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See NEIL1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
9
Annotation release Status Assembly Chr Location
100 current cyaCae2 (GCF_002901205.1) 10 Unlocalized Scaffold NW_019776470.1 (18809652..18812901, complement)

NW_019776470.1Genomic Context describing neighboring genes Neighboring gene SIN3 transcription regulator family member A Neighboring gene uncharacterized LOC111934264 Neighboring gene mannosidase alpha class 2C member 1 Neighboring gene mucin-1-like Neighboring gene chromosome 10 C15orf39 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019776470 Chromosome 10 Unlocalized Scaffold Reference cyaCae2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA N-glycosylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-(apurinic or apyrimidinic site) endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in base-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endonuclease 8-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyanistes caeruleus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference cyaCae2

Genomic

  1. NW_019776470.1 Reference cyaCae2

    Range
    18809652..18812901 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023934261.1 → XP_023790029.1  endonuclease 8-like 1

    UniProtKB/TrEMBL
    A0A8C0VSN0
    Related
    ENSCCEP00000027100.1, ENSCCET00000040201.1
    Conserved Domains (3) summary
    pfam09292
    Location:175 → 213
    Neil1-DNA_bind; Endonuclease VIII-like 1, DNA bind
    cl03119
    Location:1 → 46
    FpgNei_N; N-terminal domain of Fpg (formamidopyrimidine-DNA glycosylase, MutM)_Nei (endonuclease VIII) base-excision repair DNA glycosylases
    cl26942
    Location:1 → 119
    H2TH; Formamidopyrimidine-DNA glycosylase H2TH domain
Nucleotide Protein
Heading Accession and Version

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