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GRIN2B glutamate ionotropic receptor NMDA type subunit 2B [ Cyanistes caeruleus (blue tit) ]

Gene ID: 111934106, updated on 15-Mar-2024

Summary

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Gene symbol
GRIN2B
Gene description
glutamate ionotropic receptor NMDA type subunit 2B
See related
Ensembl:ENSCCEG00000012135
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyanistes caeruleus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Cyanistes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
100 current cyaCae2 (GCF_002901205.1) 1 Unlocalized Scaffold NW_019776201.1 (25400755..25570160, complement)

NW_019776201.1Genomic Context describing neighboring genes Neighboring gene nuclear receptor subfamily 1 group H member 4 Neighboring gene growth arrest specific 2 like 3 Neighboring gene uncharacterized LOC111937361 Neighboring gene uncharacterized LOC111934112

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019776201 Chromosome 1 Unlocalized Scaffold Reference cyaCae2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NMDA glutamate receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in excitatory postsynaptic potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-term synaptic potentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of NMDA selective glutamate receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamate receptor ionotropic, NMDA 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyanistes caeruleus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference cyaCae2

Genomic

  1. NW_019776201.1 Reference cyaCae2

    Range
    25400755..25570160 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023933981.1 → XP_023789749.1  glutamate receptor ionotropic, NMDA 2B isoform X1

    UniProtKB/TrEMBL
    A0A8C0URA6, A0A8C0UVV7
    Related
    ENSCCEP00000012584.1, ENSCCET00000019600.1
    Conserved Domains (3) summary
    cd06378
    Location:33 → 393
    PBP1_iGluR_NMDA_NR2; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the NR2 subunit of NMDA receptor family
    cd13718
    Location:405 → 805
    PBP2_iGluR_NMDA_Nr2; The ligand-binding domain of the NR2 subunit of ionotropic NMDA (N-methyl-D-aspartate) glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    pfam10565
    Location:842 → 1503
    NMDAR2_C; N-methyl D-aspartate receptor 2B3 C-terminus

  2. XM_023933983.1 → XP_023789751.1  glutamate receptor ionotropic, NMDA 2B isoform X2

    UniProtKB/TrEMBL
    A0A8C0UVV7
    Related
    ENSCCEP00000012585.1, ENSCCET00000019601.1
    Conserved Domains (3) summary
    cd06378
    Location:1 → 252
    PBP1_iGluR_NMDA_NR2; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the NR2 subunit of NMDA receptor family
    cd13718
    Location:264 → 664
    PBP2_iGluR_NMDA_Nr2; The ligand-binding domain of the NR2 subunit of ionotropic NMDA (N-methyl-D-aspartate) glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    pfam10565
    Location:701 → 1362
    NMDAR2_C; N-methyl D-aspartate receptor 2B3 C-terminus
Nucleotide Protein
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