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TCERG1L transcription elongation regulator 1 like [ Cyanistes caeruleus (blue tit) ]

Gene ID: 111931651, updated on 15-Mar-2024

Summary

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Gene symbol
TCERG1L
Gene description
transcription elongation regulator 1 like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyanistes caeruleus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Cyanistes
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
100 current cyaCae2 (GCF_002901205.1) 6 Unlocalized Scaffold NW_019776429.1 (204044..248527)

NW_019776429.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 2 regulatory subunit Bdelta Neighboring gene uncharacterized LOC111931659 Neighboring gene glutaredoxin-3-like Neighboring gene glutaredoxin-3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019776429 Chromosome 6 Unlocalized Scaffold Reference cyaCae2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription elongation regulator 1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyanistes caeruleus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference cyaCae2

Genomic

  1. NW_019776429.1 Reference cyaCae2

    Range
    204044..248527
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023930355.1 → XP_023786123.1  transcription elongation regulator 1-like protein

    UniProtKB/TrEMBL
    A0A8C0VJC9
    Conserved Domains (3) summary
    pfam01846
    Location:453 → 501
    FF; FF domain
    cl00157
    Location:272 → 518
    WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
    cl26464
    Location:150 → 274
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

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