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GOT1 glutamic-oxaloacetic transaminase 1 [ Cyanistes caeruleus (blue tit) ]

Gene ID: 111930931, updated on 15-Mar-2024

Summary

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Gene symbol
GOT1
Gene description
glutamic-oxaloacetic transaminase 1
See related
Ensembl:ENSCCEG00000022269
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyanistes caeruleus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Cyanistes
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See GOT1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
100 current cyaCae2 (GCF_002901205.1) 6 Unlocalized Scaffold NW_019776420.1 (11422161..11425849)

NW_019776420.1Genomic Context describing neighboring genes Neighboring gene cutC copper transporter Neighboring gene solute carrier family 25 member 28 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 1 Neighboring gene heparanase 2 (inactive) Neighboring gene uncharacterized LOC111931225

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019776420 Chromosome 6 Unlocalized Scaffold Reference cyaCae2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-aspartate:2-oxoglutarate aminotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in aspartate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartate aminotransferase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyanistes caeruleus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference cyaCae2

Genomic

  1. NW_019776420.1 Reference cyaCae2

    Range
    11422161..11425849
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023929249.1 → XP_023785017.1  aspartate aminotransferase, cytoplasmic

    UniProtKB/TrEMBL
    A0A8C0ZJF3
    Related
    ENSCCEP00000025218.1, ENSCCET00000037646.1
    Conserved Domains (1) summary
    cl18945
    Location:13 → 386
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
Nucleotide Protein
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