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SMPDL3A sphingomyelin phosphodiesterase acid like 3A [ Cyanistes caeruleus (blue tit) ]

Gene ID: 111927272, updated on 15-Mar-2024

Summary

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Gene symbol
SMPDL3A
Gene description
sphingomyelin phosphodiesterase acid like 3A
See related
Ensembl:ENSCCEG00000015041
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyanistes caeruleus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Cyanistes
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
100 current cyaCae2 (GCF_002901205.1) 3 Unlocalized Scaffold NW_019776351.1 (10302682..10314887)

NW_019776351.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111927203 Neighboring gene cAMP-dependent protein kinase inhibitor beta Neighboring gene fatty acid binding protein 7 Neighboring gene clavesin 2 Neighboring gene uncharacterized LOC111927301

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019776351 Chromosome 3 Unlocalized Scaffold Reference cyaCae2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingomyelin phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sphingomyelin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acid sphingomyelinase-like phosphodiesterase 3a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyanistes caeruleus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference cyaCae2

Genomic

  1. NW_019776351.1 Reference cyaCae2

    Range
    10302682..10314887
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023924122.1 → XP_023779890.1  acid sphingomyelinase-like phosphodiesterase 3a

    UniProtKB/TrEMBL
    A0A8C0UXJ2
    Related
    ENSCCEP00000016007.1, ENSCCET00000024796.1
    Conserved Domains (1) summary
    cd00842
    Location:4 → 303
    MPP_ASMase; acid sphingomyelinase and related proteins, metallophosphatase domain
Nucleotide Protein
Heading Accession and Version

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