U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CCN4 cellular communication network factor 4 [ Cyanistes caeruleus (blue tit) ]

Gene ID: 111925151, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CCN4
Gene description
cellular communication network factor 4
See related
Ensembl:ENSCCEG00000012551
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyanistes caeruleus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Cyanistes
Also known as
WISP1
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
100 current cyaCae2 (GCF_002901205.1) 2 Unlocalized Scaffold NW_019776303.1 (9607376..9640785)

NW_019776303.1Genomic Context describing neighboring genes Neighboring gene thyroglobulin-like Neighboring gene Src like adaptor Neighboring gene N-myc downstream regulated 1 Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_019776303 Chromosome 2 Unlocalized Scaffold Reference cyaCae2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
WNT1-inducible-signaling pathway protein 1
Names
WNT1 inducible signaling pathway protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cyanistes caeruleus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference cyaCae2

Genomic

  1. NW_019776303.1 Reference cyaCae2

    Range
    9607376..9640785
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023921550.1 → XP_023777318.1  WNT1-inducible-signaling pathway protein 1 isoform X4

    Conserved Domains (4) summary
    smart00209
    Location:245 → 283
    TSP1; Thrombospondin type 1 repeats
    pfam00219
    Location:73 → 125
    IGFBP; Insulin-like growth factor binding protein
    cl17735
    Location:147 → 206
    VWC; von Willebrand factor type C domain
    cl21545
    Location:305 → 369
    GHB_like; Glycoprotein hormone beta chain homologues

  2. XM_023921547.1 → XP_023777315.1  WNT1-inducible-signaling pathway protein 1 isoform X1

    Conserved Domains (4) summary
    smart00209
    Location:232 → 270
    TSP1; Thrombospondin type 1 repeats
    pfam00219
    Location:60 → 112
    IGFBP; Insulin-like growth factor binding protein
    cl17735
    Location:134 → 193
    VWC; von Willebrand factor type C domain
    cl21545
    Location:292 → 356
    GHB_like; Glycoprotein hormone beta chain homologues

  3. XM_023921549.1 → XP_023777317.1  WNT1-inducible-signaling pathway protein 1 isoform X3

    Conserved Domains (3) summary
    smart00209
    Location:182 → 220
    TSP1; Thrombospondin type 1 repeats
    pfam00219
    Location:60 → 112
    IGFBP; Insulin-like growth factor binding protein
    cl21545
    Location:242 → 306
    GHB_like; Glycoprotein hormone beta chain homologues

  4. XM_023921548.1 → XP_023777316.1  WNT1-inducible-signaling pathway protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0URG2
    Related
    ENSCCEP00000013063.1, ENSCCET00000020324.1
    Conserved Domains (4) summary
    smart00209
    Location:214 → 252
    TSP1; Thrombospondin type 1 repeats
    pfam00219
    Location:42 → 94
    IGFBP; Insulin-like growth factor binding protein
    cl17735
    Location:116 → 175
    VWC; von Willebrand factor type C domain
    cl21545
    Location:274 → 338
    GHB_like; Glycoprotein hormone beta chain homologues
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.