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det1 DET1 partner of COP1 E3 ubiquitin ligase [ Paramormyrops kingsleyae ]

Gene ID: 111859178, updated on 11-Apr-2024

Summary

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Gene symbol
det1
Gene description
DET1 partner of COP1 E3 ubiquitin ligase
See related
Ensembl:ENSPKIG00000014666
Gene type
protein coding
RefSeq status
MODEL
Organism
Paramormyrops kingsleyae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Mormyridae; Paramormyrops
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current PKINGS_0.1 (GCF_002872115.1) Unplaced Scaffold NW_019714565.1 (12927..17705, complement)

NW_019714565.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein S11 Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene microtubule-associated protein 1 light chain 3 beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019714565 Unplaced Scaffold Reference PKINGS_0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-like ligase-substrate adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cullin-RING ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DET1 homolog
Names
DET1, COP1 ubiquitin ligase partner

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paramormyrops kingsleyae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PKINGS_0.1

Genomic

  1. NW_019714565.1 Reference PKINGS_0.1

    Range
    12927..17705 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023841645.1 → XP_023697413.1  DET1 homolog isoform X1

    UniProtKB/TrEMBL
    A0A3B3SYT5, A0A3B3T0M7
    Related
    ENSPKIP00000035901.1, ENSPKIT00000016841.1

  2. XM_023841646.1 → XP_023697414.1  DET1 homolog isoform X2

    UniProtKB/TrEMBL
    A0A3B3SYT5, A0A3B3SZS0
    Related
    ENSPKIP00000035915.1, ENSPKIT00000016855.1

  3. XM_023841647.1 → XP_023697415.1  DET1 homolog isoform X3

    UniProtKB/TrEMBL
    A0A3B3SYT5

RNA

  1. XR_002841762.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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