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itgbl1 integrin, beta-like 1 [ Paramormyrops kingsleyae ]

Gene ID: 111845472, updated on 15-Mar-2024

Summary

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Gene symbol
itgbl1
Gene description
integrin, beta-like 1
See related
Ensembl:ENSPKIG00000004552
Gene type
protein coding
RefSeq status
MODEL
Organism
Paramormyrops kingsleyae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Mormyridae; Paramormyrops
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current PKINGS_0.1 (GCF_002872115.1) Unplaced Scaffold NW_019711564.1 (3041158..3089811, complement)

NW_019711564.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111846085 Neighboring gene UPF3A regulator of nonsense mediated mRNA decay Neighboring gene fibroblast growth factor 14 Neighboring gene sodium leak channel, non-selective Neighboring gene propionyl-CoA carboxylase subunit alpha Neighboring gene Zic family member 2 Neighboring gene zic family member 5 (odd-paired homolog, Drosophila)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019711564 Unplaced Scaffold Reference PKINGS_0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin beta-like protein 1
Names
integrin subunit beta like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paramormyrops kingsleyae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PKINGS_0.1

Genomic

  1. NW_019711564.1 Reference PKINGS_0.1

    Range
    3041158..3089811 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023815102.1 → XP_023670870.1  integrin beta-like protein 1 isoform X3

  2. XM_023815028.1 → XP_023670796.1  integrin beta-like protein 1 isoform X2

  3. XM_023814949.1 → XP_023670717.1  integrin beta-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A3B3RM63
    Related
    ENSPKIP00000019383.1, ENSPKIT00000042875.1

  4. XM_023815183.1 → XP_023670951.1  integrin beta-like protein 1 isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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