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tbl1xr1 TBL1X receptor 1 [ Seriola lalandi dorsalis ]

Gene ID: 111671957, updated on 25-Jan-2024

Summary

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Gene symbol
tbl1xr1
Gene description
TBL1X receptor 1
See related
Ensembl:ENSSLDG00000001060
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola lalandi dorsalis (sub-species: dorsalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Sedor1 (GCF_002814215.1) Unplaced Scaffold NW_019525442.1 (379322..420044)

NW_019525442.1Genomic Context describing neighboring genes Neighboring gene meprin A subunit beta-like Neighboring gene uncharacterized LOC111671978 Neighboring gene S100 calcium binding protein P Neighboring gene uncharacterized LOC111671956 Neighboring gene N-acetylated alpha-linked acidic dipeptidase like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019525442 Unplaced Scaffold Reference Sedor1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone deacetylase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box-like/WD repeat-containing protein TBL1XR1
Names
transducin beta like 1 X-linked receptor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola lalandi dorsalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sedor1 Primary Assembly

Genomic

  1. NW_019525442.1 Reference Sedor1 Primary Assembly

    Range
    379322..420044
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023429209.1 → XP_023284977.1  F-box-like/WD repeat-containing protein TBL1XR1

    UniProtKB/TrEMBL
    A0A3B4WFF0, A0A3B4WFG7
    Related
    ENSSLDP00000001242.1, ENSSLDT00000001320.1
    Conserved Domains (3) summary
    cd00200
    Location:165 → 471
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:270 → 307
    7WD40; WD40 repeat [structural motif]
    pfam08513
    Location:7 → 31
    LisH

  2. XM_023429211.1 → XP_023284979.1  F-box-like/WD repeat-containing protein TBL1XR1

    UniProtKB/TrEMBL
    A0A3B4WFF0, A0A3B4WFG7
    Conserved Domains (3) summary
    cd00200
    Location:165 → 471
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:270 → 307
    7WD40; WD40 repeat [structural motif]
    pfam08513
    Location:7 → 31
    LisH
Nucleotide Protein
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