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sgpp2 sphingosine-1-phosphate phosphatase 2 [ Seriola lalandi dorsalis ]

Gene ID: 111671281, updated on 15-Mar-2024

Summary

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Gene symbol
sgpp2
Gene description
sphingosine-1-phosphate phosphatase 2
See related
Ensembl:ENSSLDG00000025197
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola lalandi dorsalis (sub-species: dorsalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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See sgpp2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Sedor1 (GCF_002814215.1) Unplaced Scaffold NW_019525427.1 (171293..182975)

NW_019525427.1Genomic Context describing neighboring genes Neighboring gene paired box 3b Neighboring gene E3 ubiquitin-protein ligase rnf152-B-like Neighboring gene phenylalanyl-tRNA synthetase subunit beta Neighboring gene acyl-CoA synthetase long chain family member 3a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019525427 Unplaced Scaffold Reference Sedor1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingosine-1-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingosine-1-phosphate phosphatase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola lalandi dorsalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sedor1 Primary Assembly

Genomic

  1. NW_019525427.1 Reference Sedor1 Primary Assembly

    Range
    171293..182975
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023428373.1 → XP_023284141.1  sphingosine-1-phosphate phosphatase 2

    UniProtKB/TrEMBL
    A0A3B4YQW7
    Related
    ENSSLDP00000032885.1, ENSSLDT00000033809.1
    Conserved Domains (1) summary
    cd03388
    Location:79 → 228
    PAP2_SPPase1; PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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