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rcan1 regulator of calcineurin 1 [ Seriola lalandi dorsalis ]

Gene ID: 111670332, updated on 7-Dec-2023

Summary

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Gene symbol
rcan1
Gene description
regulator of calcineurin 1
See related
Ensembl:ENSSLDG00000014941
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola lalandi dorsalis (sub-species: dorsalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
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Genomic context

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See rcan1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Sedor1 (GCF_002814215.1) Unplaced Scaffold NW_019525403.1 (2830928..2844781, complement)

NW_019525403.1Genomic Context describing neighboring genes Neighboring gene immunoglobulin lambda-1 light chain-like Neighboring gene immunoglobulin lambda-1 light chain-like Neighboring gene Rho GTPase activating protein 1 Neighboring gene ADP-ribosylation factor-like 6 interacting protein 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019525403 Unplaced Scaffold Reference Sedor1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-dependent protein serine/threonine phosphatase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcipressin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola lalandi dorsalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sedor1 Primary Assembly

Genomic

  1. NW_019525403.1 Reference Sedor1 Primary Assembly

    Range
    2830928..2844781 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023427004.1 → XP_023282772.1  calcipressin-1 isoform X1

    UniProtKB/TrEMBL
    A0A3B4XLT5
    Related
    ENSSLDP00000019034.1, ENSSLDT00000019676.1
    Conserved Domains (1) summary
    cl17169
    Location:34 → 205
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_023427005.1 → XP_023282773.1  calcipressin-1 isoform X2

    UniProtKB/TrEMBL
    A0A3B4Y711
    Related
    ENSSLDP00000019043.1, ENSSLDT00000019685.1
    Conserved Domains (1) summary
    cl17169
    Location:22 → 193
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
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