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ube3c ubiquitin protein ligase E3C [ Seriola lalandi dorsalis ]

Gene ID: 111665170, updated on 15-Mar-2024

Summary

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Gene symbol
ube3c
Gene description
ubiquitin protein ligase E3C
See related
Ensembl:ENSSLDG00000021749
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola lalandi dorsalis (sub-species: dorsalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current Sedor1 (GCF_002814215.1) Unplaced Scaffold NW_019525169.1 (638233..664962, complement)

NW_019525169.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type N2 Neighboring gene DnaJ heat shock protein family (Hsp40) member B6b Neighboring gene motor neuron and pancreas homeobox 1 Neighboring gene nucleolar protein with MIF4G domain 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019525169 Unplaced Scaffold Reference Sedor1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-protein ligase E3C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola lalandi dorsalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sedor1 Primary Assembly

Genomic

  1. NW_019525169.1 Reference Sedor1 Primary Assembly

    Range
    638233..664962 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023420073.1 → XP_023275841.1  ubiquitin-protein ligase E3C

    UniProtKB/TrEMBL
    A0A3B4YIP4
    Related
    ENSSLDP00000028111.1, ENSSLDT00000028952.1
    Conserved Domains (1) summary
    cd00078
    Location:723 → 1079
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
Nucleotide Protein
Heading Accession and Version

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