U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ccn4a cellular communication network factor 4a [ Seriola lalandi dorsalis ]

Gene ID: 111659215, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ccn4a
Gene description
cellular communication network factor 4a
See related
Ensembl:ENSSLDG00000008572
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola lalandi dorsalis (sub-species: dorsalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Also known as
ccn4; wisp1
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Sedor1 (GCF_002814215.1) Unplaced Scaffold NW_019525029.1 (294393..306763, complement)

NW_019525029.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111659269 Neighboring gene N-myc downstream regulated 1a Neighboring gene Src like adaptor 1a Neighboring gene actin binding transcription modulator Neighboring gene catenin (cadherin-associated protein), alpha-like 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_019525029 Unplaced Scaffold Reference Sedor1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
WNT1-inducible-signaling pathway protein 1
Names
WNT1 inducible signaling pathway protein 1
cellular communication network factor 4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Seriola lalandi dorsalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sedor1 Primary Assembly

Genomic

  1. NW_019525029.1 Reference Sedor1 Primary Assembly

    Range
    294393..306763 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023412072.1 → XP_023267840.1  WNT1-inducible-signaling pathway protein 1

    UniProtKB/TrEMBL
    A0A3B4X4X1
    Related
    ENSSLDP00000010767.1, ENSSLDT00000011160.1
    Conserved Domains (4) summary
    smart00209
    Location:212 → 254
    TSP1; Thrombospondin type 1 repeats
    smart00214
    Location:119 → 177
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:45 → 97
    IGFBP; Insulin-like growth factor binding protein
    cl21545
    Location:282 → 340
    GHB_like; Glycoprotein hormone beta chain homologues
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.