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rab11fip3 RAB11 family interacting protein 3 (class II) [ Seriola lalandi dorsalis ]

Gene ID: 111658681, updated on 15-Mar-2024

Summary

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Gene symbol
rab11fip3
Gene description
RAB11 family interacting protein 3 (class II)
See related
Ensembl:ENSSLDG00000012839
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola lalandi dorsalis (sub-species: dorsalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Sedor1 (GCF_002814215.1) Unplaced Scaffold NW_019525017.1 (1179366..1208324, complement)

NW_019525017.1Genomic Context describing neighboring genes Neighboring gene intraflagellar transport 140 homolog (Chlamydomonas) Neighboring gene transmembrane protein 204 Neighboring gene TEL2, telomere maintenance 2, homolog (S. cerevisiae) Neighboring gene 2,4-dienoyl CoA reductase 2, peroxisomal Neighboring gene retinol dehydrogenase 13

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019525017 Unplaced Scaffold Reference Sedor1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytic recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cleavage furrow IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in midbody IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in recycling endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rab11 family-interacting protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola lalandi dorsalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sedor1 Primary Assembly

Genomic

  1. NW_019525017.1 Reference Sedor1 Primary Assembly

    Range
    1179366..1208324 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023411281.1 → XP_023267049.1  rab11 family-interacting protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A3B4XIW3
    Related
    ENSSLDP00000016176.1, ENSSLDT00000016772.1
    Conserved Domains (2) summary
    pfam13499
    Location:520 → 577
    EF-hand_7; EF-hand domain pair
    cl25732
    Location:755 → 1052
    SMC_N; RecF/RecN/SMC N terminal domain

  2. XM_023411279.1 → XP_023267047.1  rab11 family-interacting protein 3 isoform X1

    Conserved Domains (2) summary
    pfam13499
    Location:520 → 577
    EF-hand_7; EF-hand domain pair
    cl25732
    Location:801 → 1098
    SMC_N; RecF/RecN/SMC N terminal domain

  3. XM_023411280.1 → XP_023267048.1  rab11 family-interacting protein 3 isoform X2

    Conserved Domains (2) summary
    pfam13499
    Location:520 → 577
    EF-hand_7; EF-hand domain pair
    cl25732
    Location:801 → 1098
    SMC_N; RecF/RecN/SMC N terminal domain

RNA

  1. XR_002761017.1 RNA Sequence

  2. XR_002761016.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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