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prox1 prospero homeobox 1 [ Seriola lalandi dorsalis ]

Gene ID: 111650594, updated on 7-Dec-2023

Summary

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Gene symbol
prox1
Gene description
prospero homeobox 1
See related
Ensembl:ENSSLDG00000006650
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola lalandi dorsalis (sub-species: dorsalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Sedor1 (GCF_002814215.1) Unplaced Scaffold NW_019523057.1 (691981..707191, complement)

NW_019523057.1Genomic Context describing neighboring genes Neighboring gene pro-opiomelanocortin-like Neighboring gene protein tyrosine phosphatase non-receptor type 14 Neighboring gene N-lysine methyltransferase SMYD2-like Neighboring gene ribosomal protein S6 kinase polypeptide 1 Neighboring gene monooxygenase, DBH-like 1, like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019523057 Unplaced Scaffold Reference Sedor1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prospero homeobox protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola lalandi dorsalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sedor1 Primary Assembly

Genomic

  1. NW_019523057.1 Reference Sedor1 Primary Assembly

    Range
    691981..707191 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023400505.1 → XP_023256273.1  prospero homeobox protein 1

    UniProtKB/TrEMBL
    A0A3B4WZ52
    Related
    ENSSLDP00000008382.1, ENSSLDT00000008651.1
    Conserved Domains (2) summary
    pfam05044
    Location:674 → 772
    HPD; Homeo-prospero domain
    cl25732
    Location:293 → 327
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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