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neil3 nei-like DNA glycosylase 3 [ Seriola lalandi dorsalis ]

Gene ID: 111648198, updated on 15-Mar-2024

Summary

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Gene symbol
neil3
Gene description
nei-like DNA glycosylase 3
See related
Ensembl:ENSSLDG00000023598
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola lalandi dorsalis (sub-species: dorsalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Sedor1 (GCF_002814215.1) Unplaced Scaffold NW_019525660.1 (1259505..1268583, complement)

NW_019525660.1Genomic Context describing neighboring genes Neighboring gene teneurin-3-like Neighboring gene aspartylglucosaminidase Neighboring gene platelet derived growth factor c Neighboring gene glycine receptor, beta b

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019525660 Unplaced Scaffold Reference Sedor1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA N-glycosylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-(apurinic or apyrimidinic site) endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in base-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endonuclease 8-like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola lalandi dorsalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sedor1 Primary Assembly

Genomic

  1. NW_019525660.1 Reference Sedor1 Primary Assembly

    Range
    1259505..1268583 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023398010.1 → XP_023253778.1  endonuclease 8-like 3

    UniProtKB/TrEMBL
    A0A3B4YQS4
    Related
    ENSSLDP00000030638.1, ENSSLDT00000031520.1
    Conserved Domains (5) summary
    cd08969
    Location:1 → 130
    MeNeil3_N; N-terminal domain of metazoan Nei-like glycosylase 3 (NEIL3)
    sd00029
    Location:298 → 317
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:295 → 322
    zf-RanBP; Zn-finger in Ran binding protein and others
    pfam06839
    Location:529 → 573
    zf-GRF; GRF zinc finger
    cl26942
    Location:49 → 260
    H2TH; Formamidopyrimidine-DNA glycosylase H2TH domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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