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amyA Alpha-amylase [ Clostridium acetobutylicum ATCC 824 ]

Gene ID: 1116173, updated on 31-Dec-2014
Gene symbol
amyA
Gene description
Alpha-amylase
Locus tag
CA_P0168
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Clostridium acetobutylicum ATCC 824 (strain: ATCC 824)
Lineage
Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
Location:
plasmid: pSOL1
Sequence:
NC_001988.2 (181586..183868, complement)

NC_001988.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene sigF/sigE family sigma factor Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001988.2 Reference assembly

    Range
    181586..183868
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_149331.1 Alpha-amylase [Clostridium acetobutylicum ATCC 824]

    See identical proteins and their annotated locations for NP_149331.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P23671
    Conserved Domains (5) summary
    cd02688
    Location:587669
    E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus
    cd11315
    Location:53391
    AmyAc_bac1_AmyA; Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
    smart00632
    Location:392463
    Aamy_C; Aamy_C domain
    COG0366
    Location:53581
    AmyA; Glycosidases [Carbohydrate transport and metabolism]
    cl04060
    Location:482562
    CBM_25; Carbohydrate binding domain (family 25)