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evi5b ecotropic viral integration site 5b [ Amphiprion ocellaris (clown anemonefish) ]

Gene ID: 111579951, updated on 3-Apr-2024

Summary

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Gene symbol
evi5b
Gene description
ecotropic viral integration site 5b
See related
EnsemblRapid:ENSAOCG00000008291
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphiprion ocellaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Amphiprion
Also known as
evi5
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 2
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_03 current ASM2253959v1 (GCF_022539595.1) 2 NC_072767.1 (28389034..28433936, complement)
101 previous assembly AmpOce1.0 (GCF_002776465.1) Unplaced Scaffold NW_019373340.1 (55731..100731, complement)

Chromosome 2 - NC_072767.1Genomic Context describing neighboring genes Neighboring gene glomulin-like Neighboring gene growth factor independent 1A transcription repressor b Neighboring gene 60S ribosomal protein L5 Neighboring gene uncharacterized LOC118471425 Neighboring gene divergent protein kinase domain 1A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
EVI5-like protein; ecotropic viral integration site 5 protein homolog
Names
ecotropic viral integration site 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539595.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2253959v1 Primary Assembly

Genomic

  1. NC_072767.1 Reference ASM2253959v1 Primary Assembly

    Range
    28389034..28433936 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023287491.3 → XP_023143259.1  EVI5-like protein isoform X1

    UniProtKB/TrEMBL
    A0A3Q1ATC0, A0A3Q1B463
    Conserved Domains (2) summary
    smart00164
    Location:117 → 325
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    COG1196
    Location:349 → 727
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  2. XM_023287493.3 → XP_023143261.1  ecotropic viral integration site 5 protein homolog isoform X4

    UniProtKB/TrEMBL
    A0A3Q1ATC0, A0A3Q1ATI6
    Related
    ENSAOCP00000048024.1, ENSAOCT00000079031.1
    Conserved Domains (2) summary
    smart00164
    Location:117 → 325
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cl25732
    Location:362 → 660
    SMC_N; RecF/RecN/SMC N terminal domain

  3. XM_055017324.1 → XP_054873299.1  EVI5-like protein isoform X2

    Related
    ENSAOCP00000004812.2, ENSAOCT00000007400.2

  4. XM_023287488.3 → XP_023143256.1  EVI5-like protein isoform X1

    UniProtKB/TrEMBL
    A0A3Q1ATC0, A0A3Q1B463
    Related
    ENSAOCP00000004856.1, ENSAOCT00000007332.2
    Conserved Domains (2) summary
    smart00164
    Location:117 → 325
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    COG1196
    Location:349 → 727
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  5. XM_023287490.3 → XP_023143258.1  EVI5-like protein isoform X1

    UniProtKB/TrEMBL
    A0A3Q1ATC0, A0A3Q1B463
    Conserved Domains (2) summary
    smart00164
    Location:117 → 325
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    COG1196
    Location:349 → 727
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  6. XM_023287489.3 → XP_023143257.1  EVI5-like protein isoform X1

    UniProtKB/TrEMBL
    A0A3Q1ATC0, A0A3Q1B463
    Conserved Domains (2) summary
    smart00164
    Location:117 → 325
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    COG1196
    Location:349 → 727
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  7. XM_023287492.3 → XP_023143260.1  EVI5-like protein isoform X3

    UniProtKB/TrEMBL
    A0A3Q1ATC0, A0A3Q1CA01
    Related
    ENSAOCP00000022633.1, ENSAOCT00000007456.2
    Conserved Domains (2) summary
    smart00164
    Location:71 → 279
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cl25732
    Location:303 → 681
    SMC_N; RecF/RecN/SMC N terminal domain

  8. XM_055017329.1 → XP_054873304.1  EVI5-like protein isoform X5

Nucleotide Protein
Heading Accession and Version

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