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slmapa sarcolemma associated protein a [ Amphiprion ocellaris (clown anemonefish) ]

Gene ID: 111575766, updated on 15-Mar-2024

Summary

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Gene symbol
slmapa
Gene description
sarcolemma associated protein a
See related
EnsemblRapid:ENSAOCG00000000836
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphiprion ocellaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Amphiprion
Also known as
slmap
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 5
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2023_03 current ASM2253959v1 (GCF_022539595.1) 5 NC_072770.1 (580597..656518, complement)
101 previous assembly AmpOce1.0 (GCF_002776465.1) Unplaced Scaffold NW_019372917.1 (253322..329643, complement)

Chromosome 5 - NC_072770.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 79-like Neighboring gene zinc finger CCCH-type containing 11A Neighboring gene DENN/MADD domain containing 6Aa Neighboring gene uncharacterized LOC111575773

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane depolarization during cardiac muscle cell action potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of voltage-gated sodium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sarcolemma associated protein a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539595.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2253959v1 Primary Assembly

Genomic

  1. NC_072770.1 Reference ASM2253959v1 Primary Assembly

    Range
    580597..656518 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023281092.3 → XP_023136860.2  sarcolemma associated protein a isoform X11

    Related
    ENSAOCP00000044720.1, ENSAOCT00000064748.1

  2. XM_023281090.3 → XP_023136858.2  sarcolemma associated protein a isoform X9

  3. XM_035953244.2 → XP_035809137.2  sarcolemma associated protein a isoform X15

    Related
    ENSAOCP00000009235.2, ENSAOCT00000015912.2

  4. XM_023281091.3 → XP_023136859.2  sarcolemma associated protein a isoform X10

  5. XM_023281095.3 → XP_023136863.2  sarcolemma associated protein a isoform X13

    Related
    ENSAOCP00000009209.2, ENSAOCT00000015864.2

  6. XM_023281089.3 → XP_023136857.2  sarcolemma associated protein a isoform X8

    Related
    ENSAOCP00000009259.2, ENSAOCT00000015922.2

  7. XM_035953243.2 → XP_035809136.2  sarcolemma associated protein a isoform X14

  8. XM_023281087.3 → XP_023136855.2  sarcolemma associated protein a isoform X7

  9. XM_023281085.3 → XP_023136853.2  sarcolemma associated protein a isoform X5

  10. XM_023281084.3 → XP_023136852.2  sarcolemma associated protein a isoform X4

  11. XM_023281086.3 → XP_023136854.2  sarcolemma associated protein a isoform X6

  12. XM_023281094.3 → XP_023136862.2  sarcolemma associated protein a isoform X2

    Related
    ENSAOCP00000056214.1, ENSAOCT00000081117.1

  13. XM_023281082.3 → XP_023136850.2  sarcolemma associated protein a isoform X1

  14. XM_023281083.3 → XP_023136851.2  sarcolemma associated protein a isoform X3

    Related
    ENSAOCP00000025670.2, ENSAOCT00000029360.2

  15. XM_023281093.3 → XP_023136861.2  sarcolemma associated protein a isoform X12

Nucleotide Protein
Heading Accession and Version

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