U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

rnf144b ring finger protein 144B [ Amphiprion ocellaris (clown anemonefish) ]

Gene ID: 111569406, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
rnf144b
Gene description
ring finger protein 144B
See related
EnsemblRapid:ENSAOCG00000010340
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphiprion ocellaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Amphiprion
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current ASM2253959v1 (GCF_022539595.1) 9 NC_072774.1 (34044881..34061543)
101 previous assembly AmpOce1.0 (GCF_002776465.1) Unplaced Scaffold NW_019372202.1 (1564475..1580143)

Chromosome 9 - NC_072774.1Genomic Context describing neighboring genes Neighboring gene spire-type actin nucleation factor 1b Neighboring gene uncharacterized LOC111569412 Neighboring gene IQ motif containing G Neighboring gene uncharacterized LOC111569415 Neighboring gene uncharacterized LOC129349593

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin conjugating enzyme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrial membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
E3 ubiquitin-protein ligase RNF144B

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_022539595.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2253959v1 Primary Assembly

Genomic

  1. NC_072774.1 Reference ASM2253959v1 Primary Assembly

    Range
    34044881..34061543
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035948723.2 → XP_035804616.2  E3 ubiquitin-protein ligase RNF144B

  2. XM_023271494.3 → XP_023127262.2  E3 ubiquitin-protein ligase RNF144B

  3. XM_055013980.1 → XP_054869955.1  E3 ubiquitin-protein ligase RNF144B

    Related
    ENSAOCP00000006658.2, ENSAOCT00000004187.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.