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zswim8 zinc finger, SWIM-type containing 8 [ Amphiprion ocellaris (clown anemonefish) ]

Gene ID: 111563641, updated on 15-Mar-2024

Summary

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Gene symbol
zswim8
Gene description
zinc finger, SWIM-type containing 8
See related
EnsemblRapid:ENSAOCG00000011513
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphiprion ocellaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Amphiprion
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 16
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2023_03 current ASM2253959v1 (GCF_022539595.1) 16 NC_072781.1 (20649624..20703920)
101 previous assembly AmpOce1.0 (GCF_002776465.1) Unplaced Scaffold NW_019376095.1 (408015..461345, complement)

Chromosome 16 - NC_072781.1Genomic Context describing neighboring genes Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 1 Neighboring gene neurotrypsin Neighboring gene N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a Neighboring gene uncharacterized si:dkey-191g9.7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul2-RING ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger SWIM domain-containing protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539595.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2253959v1 Primary Assembly

Genomic

  1. NC_072781.1 Reference ASM2253959v1 Primary Assembly

    Range
    20649624..20703920
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035944728.2 → XP_035800621.2  zinc finger SWIM domain-containing protein 8 isoform X1

    Related
    ENSAOCP00000049071.1, ENSAOCT00000036465.1

  2. XM_023262805.3 → XP_023118573.2  zinc finger SWIM domain-containing protein 8 isoform X2

    Related
    ENSAOCP00000007620.2, ENSAOCT00000002511.2
Nucleotide Protein
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