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nsmce2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase [ Amphiprion ocellaris (clown anemonefish) ]

Gene ID: 111562438, updated on 15-Mar-2024

Summary

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Gene symbol
nsmce2
Gene description
NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase
See related
EnsemblRapid:ENSAOCG00000020458
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphiprion ocellaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Amphiprion
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_03 current ASM2253959v1 (GCF_022539595.1) 9 NC_072774.1 (26836051..26842779)
101 previous assembly AmpOce1.0 (GCF_002776465.1) Unplaced Scaffold NW_019371730.1 (774067..780824)

Chromosome 9 - NC_072774.1Genomic Context describing neighboring genes Neighboring gene exostosin-1a Neighboring gene WASH complex subunit 5 Neighboring gene LRAT domain containing 2b Neighboring gene kelch-like protein 38

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SUMO ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein sumoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Smc5-Smc6 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 SUMO-protein ligase NSE2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539595.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2253959v1 Primary Assembly

Genomic

  1. NC_072774.1 Reference ASM2253959v1 Primary Assembly

    Range
    26836051..26842779
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023260952.3 → XP_023116720.2  E3 SUMO-protein ligase NSE2

    Related
    ENSAOCP00000066294.1, ENSAOCT00000040584.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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