U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PLOD2 procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111544715, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
PLOD2
Gene description
procollagen-lysine,2-oxoglutarate 5-dioxygenase 2
See related
Ensembl:ENSPTEG00000010356
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
20
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 2 NC_045435.1 (168604276..168704325, complement)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019317277.1 (4082624..4180070, complement)

Chromosome 2 - NC_045435.1Genomic Context describing neighboring genes Neighboring gene ganglioside GM2 activator pseudogene Neighboring gene uncharacterized protein K02A2.6-like Neighboring gene phospholipid scramblase 4 Neighboring gene uncharacterized LOC116418724 Neighboring gene phospholipid scramblase 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-lysine 5-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-lysine hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
procollagen-lysine,2-oxoglutarate 5-dioxygenase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045435.1 Reference ASM277652v3

    Range
    168604276..168704325 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023215372.2 → XP_023071140.1  procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C9GSR0
    Related
    ENSPTEP00000009149.1
    Conserved Domains (1) summary
    smart00702
    Location:572 → 735
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  2. XM_023215371.1 → XP_023071139.1  procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C9GT41
    Related
    ENSPTEP00000009143.1, ENSPTET00000013901.1
    Conserved Domains (1) summary
    smart00702
    Location:593 → 756
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.