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RFX8 regulatory factor X8 [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111542250, updated on 15-Mar-2024

Summary

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Gene symbol
RFX8
Gene description
regulatory factor X8
See related
Ensembl:ENSPTEG00000021365
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
15
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 15 NC_045448.1 (103001247..103079010)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019317172.1 (5209053..5286232)

Chromosome 15 - NC_045448.1Genomic Context describing neighboring genes Neighboring gene lysosomal Pro-X carboxypeptidase pseudogene Neighboring gene 40S ribosomal protein S6 pseudogene Neighboring gene cellular repressor of E1A stimulated genes 2 Neighboring gene ring finger protein 149

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-binding protein RFX8
Names
RFX family member 8, lacking RFX DNA binding domain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045448.1 Reference ASM277652v3

    Range
    103001247..103079010
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031934188.1 → XP_031790048.1  DNA-binding protein RFX8 isoform X3

  2. XM_031934190.1 → XP_031790050.1  DNA-binding protein RFX8 isoform X3

  3. XM_031934189.1 → XP_031790049.1  DNA-binding protein RFX8 isoform X3

  4. XM_023211507.2 → XP_023067275.1  DNA-binding protein RFX8 isoform X2

    UniProtKB/TrEMBL
    A0A8C9HHQ0
    Related
    ENSPTEP00000020082.1
    Conserved Domains (1) summary
    pfam02257
    Location:1 → 25
    RFX_DNA_binding; RFX DNA-binding domain

  5. XM_023211506.1 → XP_023067274.1  DNA-binding protein RFX8 isoform X1

    UniProtKB/TrEMBL
    A0A8C9HEM2, A0A8C9HHQ0
    Related
    ENSPTEP00000020084.1, ENSPTET00000029238.1
    Conserved Domains (1) summary
    pfam02257
    Location:1 → 53
    RFX_DNA_binding; RFX DNA-binding domain
Nucleotide Protein
Heading Accession and Version

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