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ITGA1 integrin subunit alpha 1 [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111541654, updated on 15-Mar-2024

Summary

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Gene symbol
ITGA1
Gene description
integrin subunit alpha 1
See related
Ensembl:ENSPTEG00000021823
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
29
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 4 NC_045437.1 (66553122..66720724, complement)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019317163.1 (13265423..13432911, complement)

Chromosome 4 - NC_045437.1Genomic Context describing neighboring genes Neighboring gene molybdenum cofactor synthesis 2 Neighboring gene integrin subunit alpha 2 Neighboring gene mortality factor 4-like protein 2 Neighboring gene pelota mRNA surveillance and ribosome rescue factor Neighboring gene uncharacterized LOC111541662

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045437.1 Reference ASM277652v3

    Range
    66553122..66720724 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023210559.3 → XP_023066327.1  integrin alpha-1

    UniProtKB/TrEMBL
    A0A8C9HII7, A0A8C9HRU6
    Related
    ENSPTEP00000020616.1
    Conserved Domains (3) summary
    smart00191
    Location:568 → 621
    Int_alpha; Integrin alpha (beta-propellor repeats)
    cd01469
    Location:171 → 351
    vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
    pfam08441
    Location:664 → 1033
    Integrin_alpha2; Integrin alpha
Nucleotide Protein
Heading Accession and Version

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