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TAPT1 transmembrane anterior posterior transformation 1 [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111539173, updated on 15-Mar-2024

Summary

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Gene symbol
TAPT1
Gene description
transmembrane anterior posterior transformation 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
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Genomic context

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See TAPT1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 3 NC_045436.1 (169638732..169704743)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019317077.1 (14833201..14899302, complement)

Chromosome 3 - NC_045436.1Genomic Context describing neighboring genes Neighboring gene zinc finger E-box-binding homeobox 2 pseudogene Neighboring gene translation initiation factor IF-2-like Neighboring gene prominin 1 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC111539172 Neighboring gene fibroblast growth factor binding protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in maintenance of protein localization in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane anterior posterior transformation protein 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045436.1 Reference ASM277652v3

    Range
    169638732..169704743
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023206952.1 → XP_023062720.1  transmembrane anterior posterior transformation protein 1 homolog isoform X1

    Conserved Domains (1) summary
    pfam05346
    Location:155 → 459
    DUF747; Eukaryotic membrane protein family

  2. XM_023206953.1 → XP_023062721.1  transmembrane anterior posterior transformation protein 1 homolog isoform X2

    Conserved Domains (1) summary
    pfam05346
    Location:44 → 348
    DUF747; Eukaryotic membrane protein family

RNA

  1. XR_002730600.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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