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CD22 CD22 molecule [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111529933, updated on 15-Mar-2024

Summary

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Gene symbol
CD22
Gene description
CD22 molecule
See related
Ensembl:ENSPTEG00000018704
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 21
Exon count:
14
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 21 NC_045454.1 (22033126..22051083, complement)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019321714.1 (455558..473649, complement)

Chromosome 21 - NC_045454.1Genomic Context describing neighboring genes Neighboring gene free fatty acid receptor 3 Neighboring gene free fatty acid receptor 1 Neighboring gene uncharacterized LOC111529934 Neighboring gene myelin associated glycoprotein Neighboring gene hepcidin antimicrobial peptide

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
B-cell receptor CD22

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045454.1 Reference ASM277652v3

    Range
    22033126..22051083 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023196970.1 → XP_023052738.1  B-cell receptor CD22 isoform X4

    Conserved Domains (4) summary
    smart00409
    Location:486 → 557
    IG; Immunoglobulin
    pfam08205
    Location:23 → 103
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13927
    Location:217 → 280
    Ig_3; Immunoglobulin domain
    cl28434
    Location:125 → 207
    I-set; Immunoglobulin I-set domain

  2. XM_023196967.1 → XP_023052735.1  B-cell receptor CD22 isoform X2

    Conserved Domains (5) summary
    smart00409
    Location:605 → 676
    IG; Immunoglobulin
    pfam08205
    Location:142 → 222
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13927
    Location:336 → 399
    Ig_3; Immunoglobulin domain
    cl11960
    Location:22 → 121
    Ig; Immunoglobulin domain
    cl28434
    Location:244 → 326
    I-set; Immunoglobulin I-set domain

  3. XM_023196969.1 → XP_023052737.1  B-cell receptor CD22 isoform X3

    Conserved Domains (5) summary
    smart00409
    Location:518 → 589
    IG; Immunoglobulin
    pfam08205
    Location:144 → 224
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13927
    Location:249 → 312
    Ig_3; Immunoglobulin domain
    cl11960
    Location:24 → 123
    Ig; Immunoglobulin domain
    cl28434
    Location:422 → 501
    I-set; Immunoglobulin I-set domain

  4. XM_023196964.1 → XP_023052732.1  B-cell receptor CD22 isoform X1

    UniProtKB/TrEMBL
    A0A8C9HD29
    Related
    ENSPTEP00000017176.1, ENSPTET00000025363.1
    Conserved Domains (5) summary
    smart00409
    Location:607 → 678
    IG; Immunoglobulin
    pfam08205
    Location:144 → 224
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13927
    Location:338 → 401
    Ig_3; Immunoglobulin domain
    cl11960
    Location:24 → 123
    Ig; Immunoglobulin domain
    cl28434
    Location:246 → 328
    I-set; Immunoglobulin I-set domain

  5. XM_023196966.1 → XP_023052734.1  B-cell receptor CD22 isoform X2

    Conserved Domains (5) summary
    smart00409
    Location:605 → 676
    IG; Immunoglobulin
    pfam08205
    Location:142 → 222
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13927
    Location:336 → 399
    Ig_3; Immunoglobulin domain
    cl11960
    Location:22 → 121
    Ig; Immunoglobulin domain
    cl28434
    Location:244 → 326
    I-set; Immunoglobulin I-set domain

  6. XM_023196965.1 → XP_023052733.1  B-cell receptor CD22 isoform X1

    UniProtKB/TrEMBL
    A0A8C9HD29
    Conserved Domains (5) summary
    smart00409
    Location:607 → 678
    IG; Immunoglobulin
    pfam08205
    Location:144 → 224
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13927
    Location:338 → 401
    Ig_3; Immunoglobulin domain
    cl11960
    Location:24 → 123
    Ig; Immunoglobulin domain
    cl28434
    Location:246 → 328
    I-set; Immunoglobulin I-set domain

  7. XM_023196971.1 → XP_023052739.1  B-cell receptor CD22 isoform X4

    Conserved Domains (4) summary
    smart00409
    Location:486 → 557
    IG; Immunoglobulin
    pfam08205
    Location:23 → 103
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13927
    Location:217 → 280
    Ig_3; Immunoglobulin domain
    cl28434
    Location:125 → 207
    I-set; Immunoglobulin I-set domain
Nucleotide Protein
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