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TMLHE trimethyllysine hydroxylase, epsilon [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111527386, updated on 15-Mar-2024

Summary

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Gene symbol
TMLHE
Gene description
trimethyllysine hydroxylase, epsilon
See related
Ensembl:ENSPTEG00000004310
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
6
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 12 NC_045445.1 (265985..296869, complement)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019318577.1 (761559..862413, complement)

Chromosome 12 - NC_045445.1Genomic Context describing neighboring genes Neighboring gene vesicle associated membrane protein 7 Neighboring gene 60S ribosome subunit biogenesis protein NIP7 homolog pseudogene Neighboring gene sprouty RTK signaling antagonist 3 Neighboring gene uncharacterized LOC113221714 Neighboring gene uncharacterized LOC116418981 Neighboring gene uncharacterized LOC113221903 Neighboring gene histone H2A-Bbd type 2/3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables trimethyllysine dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trimethyllysine dioxygenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045445.1 Reference ASM277652v3

    Range
    265985..296869 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026451224.1 → XP_026307009.1  trimethyllysine dioxygenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8C9GGP4
    Related
    ENSPTEP00000003650.1, ENSPTET00000005718.1
    Conserved Domains (1) summary
    cl26676
    Location:70 → 332
    TauD; Taurine dioxygenase, alpha-ketoglutarate-dependent [Secondary metabolites biosynthesis, transport and catabolism]

  2. XM_026451225.1 → XP_026307010.1  trimethyllysine dioxygenase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8C9LIJ7
    Related
    ENSPTEP00000003643.1, ENSPTET00000005711.1
    Conserved Domains (1) summary
    cl26676
    Location:19 → 281
    TauD; Taurine dioxygenase, alpha-ketoglutarate-dependent [Secondary metabolites biosynthesis, transport and catabolism]
Nucleotide Protein
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