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RTN4 reticulon 4 [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111524896, updated on 15-Mar-2024

Summary

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Gene symbol
RTN4
Gene description
reticulon 4
See related
Ensembl:ENSPTEG00000029920
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
10
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 15 NC_045448.1 (55383207..55461442, complement)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019318473.1 (188452..266831)

Chromosome 15 - NC_045448.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein C pseudogene Neighboring gene EMAP like 6 Neighboring gene U7 small nuclear RNA Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene 40S ribosomal protein S6 pseudogene Neighboring gene clathrin heavy chain linker domain containing 1 Neighboring gene ankyrin repeat domain-containing protein 36B-like Neighboring gene ankyrin repeat domain-containing protein 36B-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum tubular network formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
reticulon-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045448.1 Reference ASM277652v3

    Range
    55383207..55461442 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023190207.3 → XP_023045975.2  reticulon-4 isoform X2

    UniProtKB/TrEMBL
    A0A8C9LVN7
    Related
    ENSPTEP00000030789.1
    Conserved Domains (1) summary
    pfam02453
    Location:186 → 350
    Reticulon

  2. XM_031934178.1 → XP_031790038.1  reticulon-4 isoform X1

    UniProtKB/TrEMBL
    A0A8C9I2R8
    Conserved Domains (1) summary
    pfam02453
    Location:205 → 369
    Reticulon

  3. XM_023190209.3 → XP_023045977.2  reticulon-4 isoform X4

    UniProtKB/TrEMBL
    A0A8C9I9A6
    Related
    ENSPTEP00000030794.1
    Conserved Domains (1) summary
    pfam02453
    Location:1006 → 1170
    Reticulon

  4. XM_023190208.2 → XP_023045976.1  reticulon-4 isoform X3

    UniProtKB/TrEMBL
    A0A8C9I4D7
    Related
    ENSPTEP00000030800.1, ENSPTET00000042591.1
    Conserved Domains (1) summary
    pfam02453
    Location:12 → 176
    Reticulon
Nucleotide Protein
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