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    prsA peptidylprolyl isomerase [ Lactococcus lactis subsp. cremoris ]

    Gene ID: 1113513, updated on 18-May-2013
    Gene symbol
    prsA
    Gene description
    peptidylprolyl isomerase
    Locus tag
    pHP003_05
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Lactococcus lactis subsp. cremoris (strain: HP, sub-species: cremoris)
    Lineage
    Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus
    Location :
    plasmid: pHP003
    Sequence :
    NC_004847.1 (4158..5326, complement)

    NC_004847.1Genomic Context describing neighboring genes Neighboring gene RepC Neighboring gene iso-ISS1 transposase Neighboring gene PrtP precursor

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Nucleotide sequence and characterization of the cell envelope proteinase plasmid in Lactococcus lactis subsp. cremoris HP. Christensson C, et al. J Appl Microbiol, 2001 Aug. PMID 11473599.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction

    -10_signal

    • Loc: c5303-5298

    -35_signal

    • Loc: c5326-5321

    RBS

    • Loc: c5071-5066
    Names
    peptidylprolyl isomerase
    NP_858118.1
    • cis/trans isomerase of peptidylprolyl; PPIase; membrane-bound lipoprotein

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004847.1

      Range
      4158..5326, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_858118.1 peptidylprolyl isomerase [Lactococcus lactis subsp. cremoris]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P0C2B5
      Conserved Domains (2) summary
      pfam00639
      Location:151 – 233
      Blast Score: 158
      Rotamase; PPIC-type PPIASE domain
      PRK04405
      Location:1 – 299
      Blast Score: 986
      prsA; peptidylprolyl isomerase; Provisional
    Nucleotide Protein
    Heading Accession and Version
    genomic AF247159.1 AAK27980.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      General information

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