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cd164 CD164 molecule, sialomucin [ Seriola dumerili (greater amberjack) ]

Gene ID: 111238895, updated on 15-Mar-2024

Summary

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Gene symbol
cd164
Gene description
CD164 molecule, sialomucin
See related
Ensembl:ENSSDUG00000019642
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174280.1 (14595440..14606121)

NW_019174280.1Genomic Context describing neighboring genes Neighboring gene GEN1 Holliday junction 5' flap endonuclease Neighboring gene peptidylprolyl isomerase (cyclophilin)-like 6 Neighboring gene uncharacterized LOC111238904 Neighboring gene centrosomal protein 57, like 1 Neighboring gene sestrin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174280 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sialomucin core protein 24

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174280.1 Reference Sdu_1.0 Primary Assembly

    Range
    14595440..14606121
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022768617.1 → XP_022624338.1  sialomucin core protein 24

    UniProtKB/TrEMBL
    A0A3B4V8H7
    Related
    ENSSDUP00000027103.1, ENSSDUT00000027583.1
    Conserved Domains (1) summary
    pfam05283
    Location:25 → 193
    MGC-24; Multi-glycosylated core protein 24 (MGC-24), sialomucin
Nucleotide Protein
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